Library Guides: Text and Data Mining (TDM): Library Resources

Relevant Articles

Applications of Microalgal Paste and Powder as Food and Feed: An Update Using Text Mining Tool.
Raja, Coelho, Hemaiswarya, Kumar, Carvalho, and Alagarsamy. "Applications of Microalgal Paste and Powder as Food and Feed: An Update Using Text Mining Tool." Beni-Suef University Journal of Basic and Applied Sciences 7.4 (2018): 740-47. Web.
Automatic Extraction of Gene-disease Associations from Literature Using Joint Ensemble Learning
Bhasuran, Balu, Natarajan, Jeyakumar, and Hernandez-Lemus, Enrique. "Automatic Extraction of Gene-disease Associations from Literature Using Joint Ensemble Learning." PloS One. 13.7 (2018): E0200699. Web.
Biomedical Text Mining: A Survey of Recent Progress
Simpson M.S., Demner-Fushman D. (2012) Biomedical Text Mining: A Survey of Recent Progress. In: Aggarwal C., Zhai C. (eds) Mining Text Data. Springer, Boston, MA
BioReader: a text mining tool for performing classification of biomedical literature.
Simon, C., Davidsen, K., Hansen, C. et al. BioReader: a text mining tool for performing classification of biomedical literature. BMC Bioinformatics 19, 57 (2019). https://doi.org/10.1186/s12859-019-2607-x
A comprehensive and quantitative comparison of text-mining in 15 million full-text articles versus their corresponding abstracts
Westergaard D, Stærfeldt HH, Tønsberg C, Jensen LJ, Brunak S (2018) A comprehensive and quantitative comparison of text-mining in 15 million full-text articles versus their corresponding abstracts. PLOS Computational Biology 14(2): e1005962. https://doi.org/10.1371/journal.pcbi.1005962
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Showcases the potential of text mining by extracting published protein–protein, disease–gene, and protein subcellular associations using a named entity recognition system, and quantitatively report on their accuracy using gold standard benchmark data sets.
Development of methods for automatic extraction of knowledge from texts of scientific publications for the creation of a knowledge base Solanum tuberosum
Saik, OV, Kolchanov, NA, Ivanisenko, TV, Demenkov, PS, and Ivanisenko, VA. "• Development of methods for automatic extraction of knowledge from texts of scientific publications for the creation of a knowledge base Solanum tuberosum" Sel'skokhoziaistvennaia Biologiia. 52.1 (2017): 63-74. Web.
Extracting Core Claims from Scientific Articles
Jansen T., Kuhn T. (2017) Extracting Core Claims from Scientific Articles. In: Bosse T., Bredeweg B. (eds) BNAIC 2016: Artificial Intelligence. BNAIC 2016. Communications in Computer and Information Science, vol 765. Springer, Cham
Information Retrieval and Text Mining Technologies for Chemistry.
Krallinger, Martin, Obdulia Rabal, Anália Lourenço, Julen Oyarzabal, and Alfonso Valencia. "Information Retrieval and Text Mining Technologies for Chemistry." Chemical Reviews 117.12 (2017): 7673-7761. Web.
Key Issue: Text mining, copyright and the benefits and barriers to innovation.
Reimer, T., 2012. Key Issue: Text mining, copyright and the benefits and barriers to innovation. Insights, 25(2), pp.212–215. DOI: http://doi.org/10.1629/2048-7754.25.2.212
A New Version of the ANDSystem Tool for Automatic Extraction of Knowledge from Scientific Publications with Expanded Functionality for Reconstruction of Associative Gene Networks by considering Tissue-specific Gene Expression
Ivanisenko, Vladimir A, Demenkov, Pavel S, Ivanisenko, Timofey V, Mishchenko, Elena L, and Saik, Olga V. "A New Version of the ANDSystem Tool for Automatic Extraction of Knowledge from Scientific Publications with Expanded Functionality for Reconstruction of Associative Gene Networks by considering Tissue-specific Gene Expression." BMC Bioinformatics. 20.S1 (2019): BMC Bioinformatics. , 2019, Vol.20(S1). Web.
PubTator: a web-based text mining tool for assisting biocuration.
Wei CH1, Kao HY, Lu Z. (2013) PubTator: a web-based text mining tool for assisting biocuration.. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W518-22. doi: 10.1093/nar/gkt441. Epub 2013 May 22.
Text-Mining Applications for Creation of Biofilm Literature Database."
Gupta, Kanika, and Ashok Kumar. "Text-Mining Applications for Creation of Biofilm Literature Database." Canadian Journal of Biotechnology 1.Special (2017): 24. Web.
Text-mining Approaches in Molecular Biology and Biomedicine.
Krallinger, Erhardt, and Valencia. "Text-mining Approaches in Molecular Biology and Biomedicine." Drug Discovery Today 10.6 (2005): 439-45. Web.

Recent TDM eBooks

To discover recent print and e-Books in either your local location or CSIRO-wide, search Discovery by keyword and refine by Creation Date

Text Mining : Concepts, Implementation, and Big Data Challenge [Link to eBook now] by Jo, Taeho
ISBN: 331991815X
Publication Date: 2018
Studies in Big Data
Text Mining in Practice with R [Link to eBook now] by Ted Kwartler
ISBN: 111928208X
Publication Date: 2017-05-12
A reliable, cost-effective approach to extracting priceless business information from all sources of text Excavating actionable business insights from data is a complex undertaking, and that complexity is magnified by an order of magnitude when the focus is on documents and other text information. This book takes a practical, hands-on approach to teaching you a reliable, cost-effective approach to mining the vast, untold riches buried within all forms of text using R.
Descriptive Data Mining Models [Link to eBook now] by David L. Olson
ISBN: 9811033390
Publication Date: 2016
This book offers an overview of knowledge management. It starts with an introduction to the subject, placing descriptive models in the context of the overall field as well as within the more specific field of data mining analysis.
Mining Text Data by Charu C. Aggarwal (Editor); ChengXiang Zhai (Editor)
ISBN: 9781461432227
Publication Date: 2012
Mining Text Data introduces an important niche in the text analytics field, and is an edited volume contributed by leading international researchers and practitioners focused on social networks & data mining. This book contains a wide swath in topics across social networks & data mining.

Relevant Journals

A selection of journals available through Library Services.